support for 6 columns ply
| | |
| | | # Rz_gamma = [[np.cos(gamma),np.sin(gamma),0],[-np.sin(gamma),np.cos(gamma),0],[0,0,1]] |
| | | |
| | | |
| | | def get_rotation_matrix(alpha_degree,beta_degree,gamma_degree,order = "x_y_z",verbose=0): |
| | | def get_rotation_matrix(alpha_degree,beta_degree,gamma_degree,rank,order = "x_y_z",verbose=0): |
| | | """generate a rotation matrix from the specific angel |
| | | """ |
| | | |
| | |
| | | if i == 0: |
| | | rotation_matrix = R_dic[s] |
| | | else: |
| | | rotation_matrix = R_dic[s] * rotation_matrix |
| | | rotation_matrix = R_dic[s] * rotation_matrix |
| | | |
| | | m = np.identity(rank) |
| | | m[:3,:3] = rotation_matrix |
| | | |
| | | if verbose == 1: |
| | | print(f"\n{alpha_degree}, rad {alpha}, Rx_alpha \n", Rx_alpha) |
| | | print(f"\n{beta_degree}, rad {beta}, Ry_beta \n", Ry_beta) |
| | | print(f"\n{gamma_degree}, rad {gamma}, Rz_gamma\n",Rz_gamma) |
| | | print("\n rotation matrix\n",rotation_matrix) |
| | | print("\n rotation matrix\n",m) |
| | | else: |
| | | pass |
| | | |
| | | return rotation_matrix |
| | | return m |
| | | |
| | | def get_origin_coordinates(): |
| | | """ |
| | |
| | | if isinstance(ply,str): |
| | | ply = read_ply(ply) |
| | | |
| | | rotation_matrix = get_rotation_matrix(angle[0],angle[1],angle[2]) |
| | | N_rows = ply.shape[0] |
| | | N_cols = ply.shape[1] |
| | | |
| | | rotation_matrix = get_rotation_matrix(angle[0],angle[1],angle[2],rank=N_cols) |
| | | |
| | | # z = (X * Y^T)^T = (Y * X^T) |
| | | # np.matmul(rotation_matrix,ply.transpose()).transpose() == np.matmul(ply,rotation_matrix) |
| | | # np.matmul(rotation_matrix,ply.transpose()).transpose() == np.matmul(ply,rotation_matrix.transpose()) |
| | | rotated_ply = np.matmul(ply,rotation_matrix.transpose()) |
| | | if i == 0: |
| | | merged_ply_array = rotated_ply.copy() |
| | | else: |
| | | merged_ply_array = np.concatenate((merged_ply_array,rotated_ply),axis= 0 ) |
| | | |
| | | merged_ply_array = np.array(merged_ply_array).reshape(-1,3) |
| | | merged_ply_array = np.array(merged_ply_array).reshape(-1,N_cols) |
| | | return merged_ply_array |
| | | |
| | | |
| | |
| | | |
| | | return target_files |
| | | |
| | | def read_ply(path:str,start_line:int = 10): |
| | | ply_array = np.load(path,skiprows=start_line) |
| | | def get_skip_rows(path): |
| | | with open(path,"r") as ply_file: |
| | | count = 0 |
| | | # read the line |
| | | for line in ply_file.readlines(): |
| | | # strip the str of the header |
| | | flag = line.strip() |
| | | if flag == "end_header": |
| | | return count + 1 |
| | | else: |
| | | if count >= 50: |
| | | return None |
| | | count += 1 |
| | | return None |
| | | |
| | | def read_ply(path:str): |
| | | start_line = get_skip_rows(path) |
| | | if start_line is not None: |
| | | ply_array = np.loadtxt(path,skiprows=start_line) |
| | | else: |
| | | ply_array = None |
| | | return ply_array |
| | | |
| | | |
| | | def write_ply(data:np.array,folder:str,name:str): |
| | | file = os.path.join(folder,name+".ply") |
| | | n_p = data.shape[0] |
| | | header = ["ply\nformat ascii 1.0\n", |
| | | "comment write_ply generated\n", |
| | | f"element vertex {n_p}\n", |
| | | "property float x\n", |
| | | "property float y\n", |
| | | "property float z\n", |
| | | "element face 0\n", |
| | | "property list uchar int vertex_indices\n", |
| | | "end_header"] |
| | | n_cols = data.shape[1] |
| | | |
| | | if n_cols == 3: |
| | | header = ["ply\nformat ascii 1.0\n", |
| | | "comment write_ply generated\n", |
| | | f"element vertex {n_p}\n", |
| | | "property float x\n", |
| | | "property float y\n", |
| | | "property float z\n", |
| | | "end_header"] |
| | | fmt = '%.6f','%.6f','%.6f' |
| | | |
| | | elif n_cols == 6: |
| | | header = ["ply\nformat ascii 1.0\n", |
| | | "comment write_ply generated\n", |
| | | f"element vertex {n_p}\n", |
| | | "property float x\n", |
| | | "property float y\n", |
| | | "property float z\n", |
| | | "property uchar red\n", |
| | | "property uchar green\n", |
| | | "property uchar blue\n", |
| | | "end_header"] |
| | | fmt = '%.6f','%.6f','%.6f','%d','%d','%d' |
| | | np.savetxt(file,data, |
| | | delimiter=" ", |
| | | header="".join(header), |
| | | comments="", |
| | | fmt='%.6f') |
| | | fmt=fmt) |
| | | print(f"{time.asctime()} {name}.ply have been saved with {n_p} points!") |
| | | |
| | | |